Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase arsc | EZ449_05540 | Not Available | Negative | 1338377 - 1338817 | 16543.7 |
| n-acetyltransferase family protein | EZ449_05545 | Not Available | Negative | 1338832 - 1339317 | 17736.5 |
| hypothetical protein | EZ449_05550 | Not Available | Negative | 1339328 - 1339795 | 17180.7 |
| arsr family transcriptional regulator | EZ449_05555 | Not Available | Negative | 1339852 - 1340181 | 11823.5 |
| duf5117 domain-containing protein | EZ449_05560 | Not Available | Negative | 1340398 - 1342908 | 93715.6 |
| peptide-binding protein | EZ449_05565 | Not Available | Negative | 1343012 - 1344259 | 47083.8 |
| peptidase s13 | EZ449_05570 | Not Available | Positive | 1344311 - 1345639 | 50100.3 |
| chitinase | EZ449_05575 | Not Available | Positive | 1345682 - 1346716 | 37996.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EZ449_05580 | Not Available | Positive | 1346720 - 1347781 | 39281.4 |
| histidine phosphatase family protein | EZ449_05585 | Not Available | Positive | 1347821 - 1348321 | 18979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

