Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | EZ449_05490 | Not Available | Positive | 1331959 - 1332468 | 19548.2 |
| hotdog fold thioesterase | EZ449_05495 | Not Available | Positive | 1332458 - 1332886 | 15732.2 |
| hypothetical protein | EZ449_05500 | Not Available | Negative | 1332935 - 1333300 | 13106.5 |
| multidrug efflux smr transporter | EZ449_05505 | Not Available | Positive | 1333458 - 1333778 | 11638.5 |
| sigma-70 family rna polymerase sigma factor | EZ449_05510 | Not Available | Positive | 1334174 - 1334755 | 22644.0 |
| hypothetical protein | EZ449_05515 | Not Available | Positive | 1334752 - 1335234 | 18114.0 |
| serine hydrolase family protein | EZ449_05520 | Not Available | Negative | 1335468 - 1335995 | 19517.8 |
| cold-shock protein | EZ449_05525 | Not Available | Negative | 1336084 - 1336275 | 6914.26 |
| hypothetical protein | EZ449_05530 | Not Available | Negative | 1336380 - 1337306 | 35219.6 |
| phosphodiester glycosidase family protein | EZ449_05535 | Not Available | Negative | 1337377 - 1338243 | 32005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

