Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3137 domain-containing protein | EZ449_05440 | Not Available | Positive | 1319756 - 1320712 | 35509.6 |
| response regulator | EZ449_05445 | Not Available | Negative | 1320882 - 1321247 | 13621.2 |
| chemotaxis protein cheb | EZ449_05450 | Not Available | Negative | 1321271 - 1321852 | 20905.2 |
| protein-glutamate o-methyltransferase cher | EZ449_05455 | Not Available | Negative | 1321837 - 1322655 | 31911.2 |
| response regulator | EZ449_05460 | Not Available | Negative | 1322656 - 1323027 | 13436.5 |
| response regulator | EZ449_05465 | Not Available | Negative | 1323041 - 1326628 | 133899.0 |
| hybrid sensor histidine kinase/response regulator | EZ449_05470 | Not Available | Negative | 1326644 - 1327777 | 42781.6 |
| metalloprotease | EZ449_05475 | Not Available | Negative | 1328050 - 1328886 | 30235.4 |
| glutamate--trna ligase | EZ449_05480 | Not Available | Negative | 1329040 - 1330548 | 56510.4 |
| hamp domain-containing histidine kinase | EZ449_05485 | Not Available | Positive | 1330770 - 1331978 | 46348.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

