Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_05390 | Not Available | Negative | 1308295 - 1308591 | 11302.2 |
| phosphatase pap2 family protein | EZ449_05395 | Not Available | Negative | 1308642 - 1309616 | 35930.7 |
| preprotein translocase subunit secg | EZ449_05400 | Not Available | Negative | 1309802 - 1310158 | 11797.7 |
| hypothetical protein | EZ449_05405 | Not Available | Negative | 1310173 - 1311246 | 40763.1 |
| hypothetical protein | EZ449_05410 | Not Available | Negative | 1311320 - 1311832 | 18636.3 |
| sigma-54-dependent fis family transcriptional regulator | EZ449_05415 | Not Available | Negative | 1311876 - 1313126 | 46706.7 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EZ449_05420 | Not Available | Negative | 1313267 - 1314682 | 53077.0 |
| hypothetical protein | EZ449_05425 | Not Available | Positive | 1315478 - 1317265 | 66898.9 |
| hypothetical protein | EZ449_05430 | Not Available | Positive | 1317332 - 1319149 | 69381.4 |
| lema family protein | EZ449_05435 | Not Available | Positive | 1319199 - 1319756 | 20813.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

