Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | EZ449_05340 | Not Available | Positive | 1292300 - 1292752 | 16679.7 |
| dead/deah box helicase | EZ449_05345 | Not Available | Positive | 1293219 - 1294445 | 45757.6 |
| aec family transporter | EZ449_05350 | Not Available | Positive | 1294517 - 1295428 | 33246.4 |
| l-serine ammonia-lyase | EZ449_05355 | Not Available | Negative | 1295905 - 1297332 | 51183.3 |
| rdd family protein | EZ449_05360 | Not Available | Positive | 1297443 - 1297940 | 18773.0 |
| mgtc/sapb family protein | EZ449_05365 | Not Available | Negative | 1297921 - 1298580 | 24500.0 |
| type ix secretion system membrane protein porp/sprf | EZ449_05370 | Not Available | Negative | 1298604 - 1299623 | 37534.3 |
| pkd domain-containing protein | EZ449_05375 | Not Available | Negative | 1299623 - 1305571 | 208322.0 |
| chaperonin groel | EZ449_05380 | Not Available | Negative | 1305884 - 1307521 | 57565.2 |
| co-chaperone groes | EZ449_05385 | Not Available | Negative | 1307648 - 1307938 | 10230.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

