Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding negative transcriptional regulator | EZ449_05290 | Not Available | Negative | 1284757 - 1285371 | 23002.4 |
| hypothetical protein | EZ449_05295 | Not Available | Negative | 1285477 - 1286751 | 46105.1 |
| sigma-70 family rna polymerase sigma factor | EZ449_05300 | Not Available | Negative | 1286744 - 1287322 | 22449.9 |
| duf4197 domain-containing protein | EZ449_05305 | Not Available | Positive | 1287707 - 1288471 | 27665.8 |
| hypothetical protein | EZ449_05310 | Not Available | Positive | 1288557 - 1289492 | 33872.3 |
| rna polymerase sigma factor | EZ449_05315 | Not Available | Positive | 1289861 - 1290412 | 21742.4 |
| hypothetical protein | EZ449_05320 | Not Available | Positive | 1290424 - 1290771 | 13547.8 |
| hypothetical protein | EZ449_05325 | Not Available | Positive | 1291348 - 1291617 | 10399.0 |
| hypothetical protein | EZ449_05330 | Not Available | Positive | 1291623 - 1291850 | 8901.38 |
| hypothetical protein | EZ449_05335 | Not Available | Positive | 1291862 - 1292245 | 14170.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

