Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_05240 | Not Available | Positive | 1275810 - 1276361 | 21792.9 |
| xre family transcriptional regulator | EZ449_05245 | Not Available | Positive | 1276699 - 1276980 | 10559.8 |
| hd domain-containing protein | EZ449_05250 | Not Available | Positive | 1277056 - 1277700 | 24494.8 |
| hypothetical protein | EZ449_05255 | Not Available | Positive | 1277775 - 1278302 | 20568.9 |
| putative dna modification/repair radical sam protein | EZ449_05260 | Not Available | Positive | 1278401 - 1279660 | 47689.9 |
| dna metabolism protein | EZ449_05265 | Not Available | Positive | 1279698 - 1280462 | 29944.6 |
| hypothetical protein | EZ449_05270 | Not Available | Positive | 1280528 - 1281154 | 23719.7 |
| sensor histidine kinase | EZ449_05275 | Not Available | Positive | 1281220 - 1282245 | 39269.6 |
| duf47 domain-containing protein | EZ449_05280 | Not Available | Positive | 1282889 - 1283536 | 24550.5 |
| inorganic phosphate transporter | EZ449_05285 | Not Available | Positive | 1283549 - 1284559 | 35691.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

