Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EZ449_05190 | Not Available | Negative | 1263194 - 1266934 | 142769.0 |
| [acyl-carrier-protein] s-malonyltransferase | EZ449_05195 | Not Available | Negative | 1267026 - 1267907 | 31152.6 |
| gtp cyclohydrolase i fole | EZ449_05200 | Not Available | Negative | 1267992 - 1268627 | 24055.1 |
| 6-carboxytetrahydropterin synthase | EZ449_05205 | Not Available | Negative | 1268655 - 1269065 | 15657.5 |
| futalosine hydrolase | EZ449_05210 | Not Available | Positive | 1269177 - 1269800 | 22948.5 |
| 1,4-dihydroxy-6-naphthoate synthase | EZ449_05215 | Not Available | Positive | 1269841 - 1270689 | 31683.2 |
| response regulator transcription factor | EZ449_05220 | Not Available | Negative | 1271257 - 1271961 | 26662.4 |
| hamp domain-containing histidine kinase | EZ449_05225 | Not Available | Negative | 1272126 - 1273958 | 69239.7 |
| duf3127 domain-containing protein | EZ449_05230 | Not Available | Negative | 1274182 - 1274550 | 13503.8 |
| class i sam-dependent rna methyltransferase | EZ449_05235 | Not Available | Positive | 1274622 - 1275800 | 44074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

