Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EZ449_05140 | Not Available | Negative | 1246752 - 1249844 | 111634.0 |
| mannonate dehydratase | EZ449_05145 | Not Available | Positive | 1250097 - 1251266 | 44256.3 |
| laci family transcriptional regulator | EZ449_05150 | Not Available | Negative | 1251270 - 1252292 | 37474.3 |
| duf5009 domain-containing protein | EZ449_05155 | Not Available | Negative | 1252367 - 1253527 | 43082.7 |
| alpha-n-arabinofuranosidase | EZ449_05160 | Not Available | Negative | 1254030 - 1255088 | 39518.5 |
| glycosyl hydrolase | EZ449_05165 | Not Available | Negative | 1255157 - 1258024 | 107548.0 |
| endo-1,4-beta-xylanase | EZ449_05170 | Not Available | Negative | 1258026 - 1259153 | 44049.6 |
| sdr family oxidoreductase | EZ449_05175 | Not Available | Negative | 1259212 - 1259952 | 26235.1 |
| glycoside hydrolase | EZ449_05180 | Not Available | Negative | 1260503 - 1262044 | 58736.5 |
| hypothetical protein | EZ449_05185 | Not Available | Positive | 1262250 - 1263152 | 34149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

