Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_05090 | Not Available | Negative | 1233205 - 1233573 | 14212.1 |
| hypothetical protein | EZ449_05095 | Not Available | Positive | 1233816 - 1234151 | 12711.6 |
| hypothetical protein | EZ449_05100 | Not Available | Positive | 1234151 - 1234363 | 8551.33 |
| deor/glpr transcriptional regulator | EZ449_05105 | Not Available | Positive | 1234651 - 1235397 | 27724.8 |
| anhydro-n-acetylmuramic acid kinase | EZ449_05110 | Not Available | Negative | 1235401 - 1236597 | 43794.7 |
| glucosamine-6-phosphate deaminase | EZ449_05115 | Not Available | Positive | 1236751 - 1238676 | 72671.5 |
| glycoside hydrolase family 43 protein | EZ449_05120 | Not Available | Negative | 1238990 - 1240642 | 61846.9 |
| sialate o-acetylesterase | EZ449_05125 | Not Available | Positive | 1240762 - 1242687 | 71724.9 |
| hypothetical protein | EZ449_05130 | Not Available | Negative | 1243171 - 1244850 | 59539.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_05135 | Not Available | Negative | 1244919 - 1246727 | 66659.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

