Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_04935 | Not Available | Negative | 1186321 - 1187223 | 33518.4 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_04940 | Not Available | Negative | 1187236 - 1188753 | 56337.9 |
| susc/raga family tonb-linked outer membrane protein | EZ449_04945 | Not Available | Negative | 1188764 - 1192342 | 131559.0 |
| duf4974 domain-containing protein | EZ449_04950 | Not Available | Negative | 1192363 - 1193562 | 45197.0 |
| sigma-70 family rna polymerase sigma factor | EZ449_04955 | Not Available | Negative | 1193639 - 1194292 | 25239.6 |
| site-specific integrase | EZ449_04960 | Not Available | Negative | 1194974 - 1196182 | 45598.2 |
| Trna-asp | Not Available | Not Available | Positive | 1196429 - 1196505 | Not Available |
| peptide chain release factor 1 | EZ449_04970 | Not Available | Negative | 1196612 - 1197685 | 40111.9 |
| udp-2,3-diacylglucosamine diphosphatase | EZ449_04975 | Not Available | Negative | 1198196 - 1198966 | 29860.6 |
| s9 family peptidase | EZ449_04980 | Not Available | Positive | 1199197 - 1201323 | 79274.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

