Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter frigidisoli strain RP-3-11
Accession NumberSJSN00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Baseplate wedge subunit | EZ449_08615 | Not Available | - | 2077409 - 2077828 | 15925.0 |
| Hypothetical protein | EZ449_08620 | Not Available | - | 2077831 - 2078109 | 8920.89 |
| type vi secretion system tip protein vgrg | EZ449_08625 | Not Available | - | 2078112 - 2079839 | 62461.4 |
| hypothetical protein | EZ449_08630 | Not Available | - | 2079846 - 2080565 | 27269.1 |
| Putative tail tube protein 2 | EZ449_08635 | Not Available | - | 2080735 - 2081190 | 17232.7 |
| Putative tail tube protein 2 | EZ449_08640 | Not Available | - | 2081196 - 2081630 | 16271.2 |
| Putative tail sheath protein | EZ449_08645 | Not Available | - | 2081652 - 2083082 | 52552.8 |
| Putative tail sheath protein | EZ449_08650 | Not Available | - | 2083087 - 2084865 | 63937.7 |
| 23s ribosomal rna | Not Available | Not Available | + | 62 - 2940 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 160 - 271 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.