Citrobacter braakii strain HH5 21

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter braakii strain HH5 21 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enables motility. This strain has a single replicon, indicating a streamlined genetic architecture that may influence its adaptability and replication efficiency. C. braakii is known to inhabit a variety of hosts, including Homo sapiens (humans), Oncorhynchus mykiss (rainbow trout), Ictalurus punctatus (channel catfish), Xenopus laevis (African clawed frog), Kurixalus bisacculus (a species of frog), and Oophaga histrionica (a poison dart frog). This diverse range of hosts suggests that C. braakii strain HH5 21 may have a versatile ecological role, potentially serving as a commensal organism in these species or, in some instances, contributing to disease. The presence of C. braakii in both aquatic and terrestrial ecosystems, as evidenced by its association with various amphibian and fish hosts, highlights its adaptability to different environments. The strain's accession number is SJSJ00000000.1, which provides a pathway for further genomic exploration and understanding of its biological functions. In summary, C. braakii strain HH5 21 exemplifies the adaptability of bacteria to diverse hosts and environments, which may play a crucial role in ecosystem dynamics and host-microbe interactions. Further studies on this strain could shed light on its ecological significance and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter braakii
Strainstrain HH5 21

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter braakii strain HH5 21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Oncorhynchus mykiss, Ictalurus punctatus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter braakii strain HH5 21, whole genome shotgun sequence.

Gene Summary

Adenine Count

1168198 bp

Thymine Count

1170813 bp

Guanine Count

1263378 bp

Cytosine Count

1271281 bp

Genome Length

4873670 bp

Protein-coding Genes

4415 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
citrate transporterEY915_12190Not AvailablePositive2504880 - 250618446151.0
triose-phosphate isomeraseEY915_12195Not AvailableNegative2506267 - 250703426819.2
duf1454 family proteinEY915_12200Not AvailableNegative2507146 - 250774221731.2
duf805 domain-containing proteinEY915_12205Not AvailablePositive2507843 - 250827416298.3
ferredoxin--nadp(+) reductaseEY915_12210Not AvailableNegative2508313 - 250905927659.5
class ii fructose-bisphosphataseEY915_12215Not AvailableNegative2509155 - 251016535825.4
glycerol kinaseEY915_12220Not AvailableNegative2510301 - 251180956089.7
aquaporinEY915_12225Not AvailableNegative2511832 - 251267729769.7
septal ring assembly protein zapbEY915_12230Not AvailablePositive2513106 - 25133519571.3
ribonuclease e activity regulator rraaEY915_12235Not AvailableNegative2513573 - 251405817419.4

Displaying genes 2521 – 2530 of 4663 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.