Citrobacter braakii strain HH6 54

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter braakii strain HH6 54 is a Gram-negative, rod-shaped bacterium that possesses flagella, indicating its motility. This strain has a single replicon, highlighting a streamlined genetic structure that is characteristic of many bacteria in the Enterobacteriaceae family to which it belongs. The strain has been isolated from various hosts, including Homo sapiens (humans), Oncorhynchus mykiss (rainbow trout), Ictalurus punctatus (channel catfish), Xenopus laevis (African clawed frog), Kurixalus bisacculus (a species of frog), and Oophaga histrionica (a poison dart frog). This wide host range suggests that Citrobacter braakii strain HH6 54 may have versatile ecological roles and could be involved in diverse microbial interactions within different host environments. The accession number for this strain is SJSI00000000.1, which provides a reference for researchers interested in studying its genomic data. Understanding the ecological interactions of Citrobacter braakii, particularly in aquatic and amphibious ecosystems, may offer insights into its roles in nutrient cycling and its potential contributions to host health or disease. Such knowledge could prove valuable in fields ranging from environmental microbiology to aquaculture and conservation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter braakii
Strainstrain HH6 54

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter braakii strain HH6 54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Oncorhynchus mykiss, Ictalurus punctatus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter braakii strain HH6 54, whole genome shotgun sequence.

Gene Summary

Adenine Count

1233958 bp

Thymine Count

1234109 bp

Guanine Count

1327671 bp

Cytosine Count

1333162 bp

Genome Length

5128900 bp

Protein-coding Genes

4805 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetoacetate metabolism transcriptional regulator atocEY916_05965Not AvailablePositive1187227 - 118861252164.3
acetate coa-transferase subunit alphaEY916_05970Not AvailablePositive1188812 - 118947123370.6
coa transferase subunit bEY916_05975Not AvailablePositive1189474 - 119012423004.2
tigr00366 family proteinEY916_05980Not AvailablePositive1190121 - 119144347236.2
acetyl-coa c-acetyltransferaseEY916_05985Not AvailablePositive1191474 - 119265840491.2
dna topoisomerase (atp-hydrolyzing) subunit aEY916_05990Not AvailableNegative1192702 - 119533897017.8
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigEY916_05995Not AvailablePositive1195497 - 119622526989.5
ribonucleoside-diphosphate reductase subunit alphaEY916_06000Not AvailablePositive1196669 - 119895485788.0
ribonucleotide-diphosphate reductase subunit betaEY916_06005Not AvailablePositive1199067 - 120019743496.8
ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfaeEY916_06010Not AvailablePositive1200197 - 12004519247.2

Displaying genes 1171 – 1180 of 4933 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.