Citrobacter braakii strain HH10 84

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter braakii strain HH10 84 is a Gram-negative, rod-shaped bacterium recognized for its motility, as evidenced by the presence of flagella. It contains a single replicon, indicating a streamlined genetic structure typical of certain bacterial species. This strain has been associated with a diverse range of hosts, including Homo sapiens (humans), Oncorhynchus mykiss (rainbow trout), Ictalurus punctatus (channel catfish), Xenopus laevis (African clawed frog), Kurixalus bisacculus (a species of frog), and Oophaga histrionica (a poison dart frog). The wide host range of Citrobacter braakii strain HH10 84 suggests its potential adaptability to various environments and organisms. This adaptability could provide insights into its ecological roles, such as its interactions within different ecosystems, including aquatic and terrestrial habitats. Furthermore, the ability to inhabit both vertebrates and humans raises questions regarding its pathogenic potential and its implications for human health and aquatic species management. As further research is conducted, understanding the specific mechanisms of Citrobacter braakii strain HH10 84's interactions with its hosts could provide valuable information regarding its ecological significance and potential applications in microbiology and environmental science. The accession number SJSE00000000.1 serves as a reference for genomic studies related to this strain, facilitating future research efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter braakii
Strainstrain HH10 84

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter braakii strain HH10 84
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Oncorhynchus mykiss, Ictalurus punctatus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter braakii strain HH10 84, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4883 genes

Non-Coding Genes

295 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxythreonine-4-phosphate dehydrogenase pdxaEY920_17475Not AvailableNegative3576840 - 357783235084.9
peptidylprolyl isomerase suraEY920_17480Not AvailableNegative3577832 - 357911847000.2
lps assembly protein lptdEY920_17485Not AvailableNegative3579172 - 358153289828.8
co-chaperone djlaEY920_17490Not AvailablePositive3581876 - 358269130702.4
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaEY920_17495Not AvailableNegative3582786 - 358344524912.2
rna polymerase-associated protein rapaEY920_17500Not AvailableNegative3583457 - 3586363109656.0
dna polymerase iiEY920_17505Not AvailableNegative3586541 - 358889290003.6
duf4751 domain-containing proteinEY920_17515Not AvailablePositive3589492 - 358987515084.5
l-ribulose-5-phosphate 4-epimeraseEY920_17520Not AvailableNegative3589920 - 359061525557.4
l-arabinose isomeraseEY920_17525Not AvailableNegative3590673 - 359217555993.0

Displaying genes 3631 – 3640 of 5178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.