Flavobacterium silvisoli strain RD-2-33

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium silvisoli strain RD-2-33 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, a trait that may influence its genomic stability and replication processes. The genomic data for this strain can be accessed under the accession number SJPE00000000.1, which provides a reference for further studies and comparisons with related species. The rod shape of Flavobacterium silvisoli RD-2-33 is typical of many members of the Flavobacterium genus, known for their role in various ecological contexts, particularly in aquatic environments. The presence of flagella suggests that this strain is adapted for movement in its habitat, which could allow it to exploit nutrient sources more effectively or evade predators. Understanding the motility and genetic characteristics of Flavobacterium silvisoli strain RD-2-33 is essential for insights into its ecological roles. As a member of the Flavobacterium genus, this strain may contribute to the decomposition of organic matter in its environment, facilitating nutrient cycling. This is particularly significant in ecosystems where microbial activity is crucial for maintaining the health and balance of aquatic systems. The characteristics of this strain underscore the importance of studying microbial diversity and functionality in ecological research.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium silvisoli
Strainstrain RD-2-33

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium silvisoli strain RD-2-33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium silvisoli strain RD-2-33 contig39, whole genome

Gene Summary

Adenine Count

892604 bp

Thymine Count

881459 bp

Guanine Count

552793 bp

Cytosine Count

567157 bp

Genome Length

2894048 bp

Protein-coding Genes

2543 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm peptidoglycan-binding domain-containing proteinEZL74_12030Not AvailableNegative2670342 - 267125034025.7
1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydraseEZL74_12035Not AvailableNegative2671243 - 267214533572.4
hypothetical proteinEZL74_12040Not AvailableNegative2672280 - 267260913458.5
hypothetical proteinEZL74_12045Not AvailablePositive2672638 - 26728207111.46
urocanate hydrataseEZL74_12050Not AvailablePositive2672850 - 267483573837.4
duf4136 domain-containing proteinEZL74_12055Not AvailablePositive2674853 - 267538320286.2
duf2334 domain-containing proteinEZL74_12060Not AvailablePositive2675473 - 267623729744.0
tungsten formylmethanofuran dehydrogenaseEZL74_12065Not AvailableNegative2676269 - 267831475606.5
branched-chain amino acid aminotransferaseEZL74_12070Not AvailableNegative2678372 - 267943039010.9
2-oxo acid dehydrogenase subunit e2EZL74_12075Not AvailableNegative2679447 - 268075748201.1

Displaying genes 2391 – 2400 of 2588 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.