Flavobacterium silvisoli strain RD-2-33

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium silvisoli strain RD-2-33 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, a trait that may influence its genomic stability and replication processes. The genomic data for this strain can be accessed under the accession number SJPE00000000.1, which provides a reference for further studies and comparisons with related species. The rod shape of Flavobacterium silvisoli RD-2-33 is typical of many members of the Flavobacterium genus, known for their role in various ecological contexts, particularly in aquatic environments. The presence of flagella suggests that this strain is adapted for movement in its habitat, which could allow it to exploit nutrient sources more effectively or evade predators. Understanding the motility and genetic characteristics of Flavobacterium silvisoli strain RD-2-33 is essential for insights into its ecological roles. As a member of the Flavobacterium genus, this strain may contribute to the decomposition of organic matter in its environment, facilitating nutrient cycling. This is particularly significant in ecosystems where microbial activity is crucial for maintaining the health and balance of aquatic systems. The characteristics of this strain underscore the importance of studying microbial diversity and functionality in ecological research.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium silvisoli
Strainstrain RD-2-33

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium silvisoli strain RD-2-33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium silvisoli strain RD-2-33 contig39, whole genome

Gene Summary

Adenine Count

892604 bp

Thymine Count

881459 bp

Guanine Count

552793 bp

Cytosine Count

567157 bp

Genome Length

2894048 bp

Protein-coding Genes

2543 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorEZL74_06875Not AvailableNegative1500279 - 150154147467.8
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabEZL74_06880Not AvailableNegative1501621 - 150306955208.0
type i dna topoisomeraseEZL74_06885Not AvailablePositive1503439 - 150594093790.9
arginaseEZL74_06890Not AvailablePositive1505944 - 150709543929.8
gliding motility lipoprotein gldkEZL74_06895Not AvailablePositive1507343 - 150875553301.5
gliding motility protein gldlEZL74_06900Not AvailablePositive1508812 - 150944122655.3
gliding motility protein gldmEZL74_06905Not AvailablePositive1509501 - 151104555148.1
gliding motility protein gldnEZL74_06910Not AvailablePositive1511090 - 151206737649.8
fad-dependent oxidoreductaseEZL74_06915Not AvailablePositive1512130 - 151317339467.5
duf983 domain-containing proteinEZL74_06920Not AvailableNegative1513163 - 151354614527.0

Displaying genes 1371 – 1380 of 2588 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.