Flavobacterium silvisoli strain RD-2-33

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium silvisoli strain RD-2-33 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, a trait that may influence its genomic stability and replication processes. The genomic data for this strain can be accessed under the accession number SJPE00000000.1, which provides a reference for further studies and comparisons with related species. The rod shape of Flavobacterium silvisoli RD-2-33 is typical of many members of the Flavobacterium genus, known for their role in various ecological contexts, particularly in aquatic environments. The presence of flagella suggests that this strain is adapted for movement in its habitat, which could allow it to exploit nutrient sources more effectively or evade predators. Understanding the motility and genetic characteristics of Flavobacterium silvisoli strain RD-2-33 is essential for insights into its ecological roles. As a member of the Flavobacterium genus, this strain may contribute to the decomposition of organic matter in its environment, facilitating nutrient cycling. This is particularly significant in ecosystems where microbial activity is crucial for maintaining the health and balance of aquatic systems. The characteristics of this strain underscore the importance of studying microbial diversity and functionality in ecological research.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium silvisoli
Strainstrain RD-2-33

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium silvisoli strain RD-2-33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium silvisoli strain RD-2-33 contig39, whole genome

Gene Summary

Adenine Count

892604 bp

Thymine Count

881459 bp

Guanine Count

552793 bp

Cytosine Count

567157 bp

Genome Length

2894048 bp

Protein-coding Genes

2543 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor pEZL74_05110Not AvailablePositive1114335 - 111489520624.7
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseEZL74_05115Not AvailablePositive1114983 - 111591232989.8
nuclear transport factor 2 family proteinEZL74_05120Not AvailablePositive1115915 - 111627413917.8
succinate--coa ligase subunit alphaEZL74_05125Not AvailablePositive1116373 - 111724530006.6
t9ss type a sorting domain-containing proteinEZL74_05130Not AvailablePositive1117339 - 111979889807.1
n-acetyltransferaseEZL74_05135Not AvailableNegative1119973 - 112054221762.9
alpha/beta hydrolaseEZL74_05140Not AvailableNegative1120610 - 112162037078.2
hypothetical proteinEZL74_05145Not AvailableNegative1121670 - 112305252643.6
short chain dehydrogenaseEZL74_05150Not AvailableNegative1123143 - 112373621234.8
nad(p)/fad-dependent oxidoreductaseEZL74_05155Not AvailableNegative1123875 - 112488836434.9

Displaying genes 1021 – 1030 of 2588 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.