Citrobacter werkmanii strain ICR003007

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii strain ICR003007 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy and carbon. This strain possesses flagella, which contributes to its mobility, allowing it to navigate its environment effectively. It falls within the mesophilic temperature range, suggesting optimal growth at moderate temperatures typically found in many natural and human-associated habitats. The strain has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. Notably, Citrobacter werkmanii ICR003007 is nonsporulating, meaning it does not form spores, which may limit its survival in extreme conditions compared to spore-forming bacteria. Understanding the ecological role of Citrobacter werkmanii ICR003007 can provide insights into its contribution to nutrient cycling, particularly in environments rich in organic matter. Its ability to metabolize various organic substrates positions it as a potential player in the degradation of pollutants or organic waste, further underscoring its ecological significance. The complete genomic data available under the accession SEJH00000000.1 could aid in future research aimed at exploring its metabolic pathways and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
Strainstrain ICR003007

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii strain ICR003007
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii strain ICR003007

Gene Summary

Adenine Count

1207312 bp

Thymine Count

1203225 bp

Guanine Count

1309078 bp

Cytosine Count

1321511 bp

Genome Length

5055811 bp

Protein-coding Genes

4677 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding protein hu-alphaEVY00_14595Not AvailablePositive3049177 - 30494499521.48
duf1481 domain-containing proteinEVY00_14600Not AvailablePositive3049461 - 305015326355.9
zinc resistance sensor/chaperone zrapEVY00_14605Not AvailableNegative3050228 - 305066515641.6
two-component system sensor histidine kinase zrasEVY00_14610Not AvailablePositive3050920 - 305230551050.8
sigma-54-dependent response regulator transcription factor zrarEVY00_14615Not AvailablePositive3052311 - 305363648525.7
phosphoribosylamine--glycine ligaseEVY00_14620Not AvailableNegative3053633 - 305492245669.5
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseEVY00_14625Not AvailableNegative3054938 - 305652757398.6
multidrug efflux rnd transporter permease subunitEVY00_14630Not AvailableNegative3057174 - 3060287112472.0
efflux rnd transporter periplasmic adaptor subunitEVY00_14635Not AvailableNegative3060299 - 306145941137.8
acref/envcd operon transcriptional regulatorEVY00_14640Not AvailablePositive3061873 - 306252924885.1

Displaying genes 3031 – 3040 of 4888 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.