Citrobacter werkmanii strain ICR003007

Gram-negativeRodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter werkmanii strain ICR003007 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy and carbon. This strain possesses flagella, which contributes to its mobility, allowing it to navigate its environment effectively. It falls within the mesophilic temperature range, suggesting optimal growth at moderate temperatures typically found in many natural and human-associated habitats. The strain has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. Notably, Citrobacter werkmanii ICR003007 is nonsporulating, meaning it does not form spores, which may limit its survival in extreme conditions compared to spore-forming bacteria. Understanding the ecological role of Citrobacter werkmanii ICR003007 can provide insights into its contribution to nutrient cycling, particularly in environments rich in organic matter. Its ability to metabolize various organic substrates positions it as a potential player in the degradation of pollutants or organic waste, further underscoring its ecological significance. The complete genomic data available under the accession SEJH00000000.1 could aid in future research aimed at exploring its metabolic pathways and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter werkmanii
Strainstrain ICR003007

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter werkmanii strain ICR003007
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Citrobacter werkmanii strain ICR003007

Gene Summary

Adenine Count

1207312 bp

Thymine Count

1203225 bp

Guanine Count

1309078 bp

Cytosine Count

1321511 bp

Genome Length

5055811 bp

Protein-coding Genes

4677 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent rna helicase srmbEVY00_07425Not AvailableNegative1581662 - 158299049588.6
trna(1)(val) (adenine(37)-n(6))-methyltransferaseEVY00_07430Not AvailablePositive1583123 - 158386027227.5
l-aspartate oxidaseEVY00_07435Not AvailableNegative1583845 - 158546760137.6
rna polymerase sigma factor rpoeEVY00_07450Not AvailablePositive1585893 - 158646821727.0
anti-sigma-e factor rseaEVY00_07455Not AvailablePositive1586500 - 158715024244.9
sigma-e factor regulatory protein rsebEVY00_07460Not AvailablePositive1587150 - 158810635791.6
soxr-reducing system protein rsecEVY00_07465Not AvailablePositive1588103 - 158856716230.8
elongation factor 4EVY00_07470Not AvailablePositive1588838 - 159063766569.2
signal peptidase iEVY00_07475Not AvailablePositive1590653 - 159162735904.4
ribonuclease iiiEVY00_07480Not AvailablePositive1591897 - 159257725507.5

Displaying genes 1641 – 1650 of 4888 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.