Citrobacter sp. AAK_AS5 Transcript_3749

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. AAK_AS5 Transcript_3749 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The accession number for this strain is SDHR00000000.1, which is essential for referencing its genomic information in biological databases. The classification of Citrobacter as a member of the Enterobacteriaceae family implies that it may play a role in various ecological niches, including soil, water, and as part of the gut microbiota in animals. The motility conferred by flagella can enhance its ability to navigate through different environments, potentially influencing its ecological interactions and survival strategies. Understanding the characteristics of Citrobacter sp. AAK_AS5, particularly its motility and genetic configuration, can provide insights into its ecological roles, such as its capacity for nutrient cycling or its interactions with other microorganisms. Overall, the traits of Citrobacter sp. AAK_AS5 Transcript_3749 underscore its potential significance in microbial ecosystems and highlight the importance of further research into its ecological functions and contributions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. AAK_AS5
StrainTranscript_3749

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. AAK_AS5 Transcript_3749
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. AAK_AS5 Transcript_3749, whole genome shotgun

Gene Summary

Adenine Count

1376752 bp

Thymine Count

1381563 bp

Guanine Count

1604405 bp

Cytosine Count

1607181 bp

Genome Length

6224673 bp

Protein-coding Genes

6720 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetate-coa oxygenase subunit paaiEO238_04515Not AvailablePositive960691 - 96144628114.4
phenylacetate-coa oxygenase subunit paajEO238_04520Not AvailablePositive961458 - 96195518308.9
phenylacetate-coa oxygenase/reductase subunit paakEO238_04525Not AvailablePositive961963 - 96303338819.2
2,3-dehydroadipyl-coa hydrataseEO238_04530Not AvailablePositive963030 - 96379727268.9
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseEO238_04535Not AvailablePositive963800 - 96458828419.4
3-hydroxyacyl-coa dehydrogenase paacEO238_04540Not AvailablePositive964592 - 96601050978.6
hydroxyphenylacetyl-coa thioesterase paaiEO238_04545Not AvailablePositive966003 - 96642515015.8
3-oxoadipyl-coa thiolaseEO238_04550Not AvailablePositive966425 - 96763042565.3
phenylacetate--coa ligaseEO238_04555Not AvailablePositive967659 - 96897848918.6
phenylacetic acid degradation operon negative regulatory protein paaxEO238_04560Not AvailablePositive969123 - 97005834881.4

Displaying genes 1021 – 1030 of 6910 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.