Flavobacterium stagni strain WWJ-16

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium stagni strain WWJ-16 is characterized by its rod-shaped morphology and the presence of flagella, which suggests that it has the ability to move in its environment. This motility may play a significant role in its ecological interactions, potentially aiding in nutrient acquisition and colonization of surfaces in aquatic habitats. The strain possesses a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in resource utilization. The genomic data for Flavobacterium stagni strain WWJ-16 can be accessed under the accession number SBKN00000000.1, providing a basis for further exploration of its genetic and metabolic capabilities. The ecological significance of Flavobacterium stagni strain WWJ-16 may relate to its role in the decomposition of organic matter in aquatic ecosystems, where members of the Flavobacterium genus are known to contribute to nutrient cycling. The combination of its motility and genetic features suggests that this strain may be well-suited for thriving in dynamic environments, potentially influencing microbial community structures and functioning in freshwater ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium stagni
Strainstrain WWJ-16

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium stagni strain WWJ-16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium stagni strain WWJ-16 NODE_37_length_215_cov_140,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2682 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ix secretion system outer membrane channel protein porvEQG61_11135Not AvailableNegative2596644 - 259784044389.8
type ix secretion system sortase poruEQG61_11140Not AvailableNegative2597877 - 2601698142112.0
gliding motility lipoprotein gldjEQG61_11145Not AvailablePositive2601892 - 260360165051.0
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseEQG61_11150Not AvailablePositive2603662 - 260493947502.0
t9ss type a sorting domain-containing proteinEQG61_11160Not AvailablePositive2605525 - 260594515351.2
atp-dependent chaperone clpbEQG61_11165Not AvailableNegative2606349 - 260893796724.3
hypothetical proteinEQG61_11170Not AvailablePositive2609139 - 260999933295.5
bacillithiol system redox-active protein ytxjEQG61_11175Not AvailablePositive2609996 - 261040314981.8
agmatine deiminase family proteinEQG61_11180Not AvailableNegative2610535 - 261162041012.5
carbon-nitrogen hydrolaseEQG61_11185Not AvailableNegative2611610 - 261248532931.9

Displaying genes 2221 – 2230 of 2729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.