Flavobacterium stagni strain WWJ-16

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium stagni strain WWJ-16 is characterized by its rod-shaped morphology and the presence of flagella, which suggests that it has the ability to move in its environment. This motility may play a significant role in its ecological interactions, potentially aiding in nutrient acquisition and colonization of surfaces in aquatic habitats. The strain possesses a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in resource utilization. The genomic data for Flavobacterium stagni strain WWJ-16 can be accessed under the accession number SBKN00000000.1, providing a basis for further exploration of its genetic and metabolic capabilities. The ecological significance of Flavobacterium stagni strain WWJ-16 may relate to its role in the decomposition of organic matter in aquatic ecosystems, where members of the Flavobacterium genus are known to contribute to nutrient cycling. The combination of its motility and genetic features suggests that this strain may be well-suited for thriving in dynamic environments, potentially influencing microbial community structures and functioning in freshwater ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium stagni
Strainstrain WWJ-16

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium stagni strain WWJ-16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium stagni strain WWJ-16 NODE_37_length_215_cov_140,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2682 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide deformylaseEQG61_05800Not AvailablePositive1317378 - 131796522578.2
hypothetical proteinEQG61_05805Not AvailablePositive1318010 - 131848317784.5
nucleoside triphosphate pyrophosphohydrolaseEQG61_05810Not AvailablePositive1318566 - 131933929843.4
amino acid permeaseEQG61_05815Not AvailablePositive1319462 - 132089851724.3
crp/fnr family transcriptional regulatorEQG61_05820Not AvailableNegative1321135 - 132181525428.0
had family hydrolaseEQG61_05825Not AvailablePositive1321926 - 132430789808.6
cbb3-type cytochrome oxidase assembly protein ccosEQG61_05830Not AvailablePositive1324397 - 13245917365.96
cytochrome-c oxidase, cbb3-type subunit iEQG61_05835Not AvailablePositive1324594 - 132677182107.6
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneEQG61_05840Not AvailablePositive1326777 - 13269506582.07
c-type cytochromeEQG61_05845Not AvailablePositive1326972 - 132790734446.3

Displaying genes 1161 – 1170 of 2729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.