Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter chitinilyticus strain CM134L-2
Accession NumberSAYW00000000.1
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2892 domain-containing protein | DPV69_00390 | Not Available | + | 87361 - 87906 | 20910.0 |
| hypothetical protein | DPV69_00395 | Not Available | - | 87961 - 88173 | 8399.87 |
| rna-binding protein | DPV69_00400 | Not Available | - | 88697 - 88885 | 6704.0 |
| lysine--trna ligase | DPV69_00405 | Not Available | - | 89041 - 90750 | 64702.8 |
| amidinotransferase | DPV69_00410 | Not Available | - | 90892 - 91806 | 34115.7 |
| amidinotransferase | DPV69_00415 | Not Available | - | 91885 - 93333 | 54484.2 |
| arginine--trna ligase | DPV69_00420 | Not Available | + | 94242 - 96014 | 66513.8 |
| sulfite exporter taue/safe family protein | DPV69_00425 | Not Available | + | 96155 - 96940 | 27686.8 |
| ai-2e family transporter | DPV69_00430 | Not Available | - | 97318 - 98442 | 41390.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DPV69_00435 | Not Available | + | 99059 - 100417 | 49874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.