Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter chitinilyticus strain CM134L-2
Accession NumberSAYW00000000.1
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | DPV69_00290 | Not Available | + | 67533 - 68036 | 19158.2 |
| bacillithiol biosynthesis deacetylase bshb1 | DPV69_00295 | Not Available | + | 68117 - 68833 | 26785.1 |
| acyl-coa dehydrogenase | DPV69_00300 | Not Available | + | 68940 - 70301 | 50387.2 |
| hypothetical protein | DPV69_00305 | Not Available | - | 70403 - 70807 | 15083.2 |
| l-lysine 6-transaminase | DPV69_00310 | Not Available | - | 71016 - 72347 | 50274.2 |
| pyridoxal-phosphate dependent enzyme | DPV69_00315 | Not Available | - | 72516 - 73379 | 31956.8 |
| hypothetical protein | DPV69_00320 | Not Available | - | 73432 - 74445 | 36262.8 |
| rlua family pseudouridine synthase | DPV69_00325 | Not Available | + | 74632 - 75666 | 39485.2 |
| 4-amino-4-deoxychorismate lyase | DPV69_00330 | Not Available | + | 75667 - 76503 | 31408.1 |
| hypothetical protein | DPV69_00335 | Not Available | + | 76618 - 77352 | 27250.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.