Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response dexh box helicase | DPV69_03290 | Not Available | Negative | 798182 - 800632 | 92442.4 |
| hypothetical protein | DPV69_03295 | Not Available | Positive | 800742 - 801422 | 24005.7 |
| atp-dependent dna ligase | DPV69_03300 | Not Available | Negative | 801426 - 803015 | 60868.6 |
| ligase-associated dna damage response exonuclease | DPV69_03305 | Not Available | Negative | 803012 - 804049 | 38428.2 |
| transcriptional regulator | DPV69_03310 | Not Available | Positive | 804206 - 804823 | 23200.0 |
| duf3307 domain-containing protein | DPV69_03315 | Not Available | Positive | 804814 - 805518 | 26529.3 |
| magnesium transporter | DPV69_03320 | Not Available | Positive | 805549 - 806898 | 49733.9 |
| organic hydroperoxide resistance protein | DPV69_03325 | Not Available | Negative | 806998 - 807408 | 14147.4 |
| fusc family protein | DPV69_03330 | Not Available | Negative | 807472 - 809628 | 82592.0 |
| s58 family peptidase | DPV69_03335 | Not Available | Positive | 809753 - 810925 | 41834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

