Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DPV69_20660 | Not Available | Positive | 5029088 - 5029684 | 23516.5 |
| hypothetical protein | DPV69_20665 | Not Available | Positive | 5029865 - 5030909 | 37359.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 5030892 - 5030955 | Not Available |
| t9ss type a sorting domain-containing protein | DPV69_20670 | Not Available | Negative | 5031169 - 5032809 | 58033.3 |
| hybrid sensor histidine kinase/response regulator | DPV69_20675 | Not Available | Positive | 5033068 - 5037000 | 147811.0 |
| tonb-dependent receptor | DPV69_20680 | Not Available | Positive | 5037431 - 5040511 | 114919.0 |
| ragb/susd family nutrient uptake outer membrane protein | DPV69_20685 | Not Available | Positive | 5040520 - 5042151 | 62065.9 |
| duf5017 domain-containing protein | DPV69_20690 | Not Available | Positive | 5042159 - 5043127 | 35811.0 |
| glycosyl hydrolase family 88 | DPV69_20695 | Not Available | Positive | 5043138 - 5044388 | 47113.6 |
| heparinase | DPV69_20700 | Not Available | Positive | 5044395 - 5046257 | 69703.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

