Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DPV69_20060 | Not Available | Positive | 4899111 - 4900745 | 60510.4 |
| hypothetical protein | DPV69_20065 | Not Available | Positive | 4901257 - 4901541 | 10097.1 |
| hypothetical protein | DPV69_20070 | Not Available | Positive | 4901576 - 4903315 | 66088.0 |
| duf5110 domain-containing protein | DPV69_20075 | Not Available | Positive | 4903351 - 4905783 | 92554.8 |
| glycoside hydrolase family 43 protein | DPV69_20080 | Not Available | Positive | 4905993 - 4907699 | 63715.6 |
| laci family transcriptional regulator | DPV69_20085 | Not Available | Positive | 4907892 - 4908911 | 37265.1 |
| carbohydrate kinase | DPV69_20090 | Not Available | Positive | 4909007 - 4910500 | 54968.6 |
| xylose isomerase | DPV69_20095 | Not Available | Positive | 4910503 - 4911834 | 50001.7 |
| sodium transporter | DPV69_20100 | Not Available | Positive | 4911859 - 4913544 | 62084.5 |
| glycoside hydrolase family 3 protein | DPV69_20105 | Not Available | Negative | 4913713 - 4915893 | 79971.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

