Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DPV69_01870 | Not Available | Negative | 452027 - 453094 | 40704.8 |
| very short patch repair endonuclease | DPV69_01875 | Not Available | Positive | 453270 - 453779 | 20525.0 |
| rrf2 family transcriptional regulator | DPV69_01880 | Not Available | Positive | 453857 - 454294 | 16112.8 |
| hepn domain-containing protein | DPV69_01885 | Not Available | Positive | 454917 - 457007 | 78308.1 |
| uroporphyrinogen-iii c-methyltransferase | DPV69_01890 | Not Available | Positive | 457064 - 457840 | 27624.3 |
| siroheme synthase | DPV69_01895 | Not Available | Positive | 457824 - 459332 | 54481.4 |
| phosphoadenylyl-sulfate reductase | DPV69_01900 | Not Available | Positive | 459337 - 460038 | 27313.5 |
| sulfate adenylyltransferase subunit cysd | DPV69_01905 | Not Available | Positive | 460387 - 461292 | 34502.8 |
| gtp-binding protein | DPV69_01910 | Not Available | Positive | 461384 - 462634 | 46155.8 |
| hypothetical protein | DPV69_01915 | Not Available | Positive | 462950 - 463129 | 6593.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

