Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | DPV69_18190 | Not Available | Negative | 4402761 - 4403885 | 43723.1 |
| beta-xylosidase | DPV69_18195 | Not Available | Negative | 4403915 - 4406074 | 80622.6 |
| alpha-l-arabinofuranosidase | DPV69_18200 | Not Available | Negative | 4406095 - 4408065 | 74056.9 |
| galactose mutarotase | DPV69_18205 | Not Available | Negative | 4408249 - 4409418 | 42653.3 |
| nudix domain-containing protein | DPV69_18210 | Not Available | Positive | 4409601 - 4410317 | 28060.1 |
| t9ss type a sorting domain-containing protein | DPV69_18215 | Not Available | Negative | 4410439 - 4414872 | 163069.0 |
| ragb/susd family nutrient uptake outer membrane protein | DPV69_18220 | Not Available | Negative | 4415097 - 4417115 | 75199.9 |
| susc/raga family tonb-linked outer membrane protein | DPV69_18225 | Not Available | Negative | 4417120 - 4420386 | 122115.0 |
| ribulokinase | DPV69_18230 | Not Available | Positive | 4420894 - 4422597 | 62125.0 |
| l-ribulose-5-phosphate 4-epimerase | DPV69_18235 | Not Available | Positive | 4422575 - 4423276 | 25966.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

