Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | DPV69_17595 | Not Available | Negative | 4261533 - 4262561 | 38092.8 |
| gliding motility-associated c-terminal domain-containing protein | DPV69_17600 | Not Available | Negative | 4262512 - 4263705 | 43520.3 |
| collagen-like protein | DPV69_17605 | Not Available | Negative | 4263702 - 4265630 | 63088.1 |
| transketolase | DPV69_17610 | Not Available | Positive | 4265856 - 4266701 | 30774.5 |
| transketolase family protein | DPV69_17615 | Not Available | Positive | 4266835 - 4267794 | 34738.9 |
| sigma-70 family rna polymerase sigma factor | DPV69_17620 | Not Available | Positive | 4267798 - 4268349 | 21558.7 |
| hypothetical protein | DPV69_17625 | Not Available | Positive | 4268389 - 4269000 | 23207.2 |
| hypothetical protein | DPV69_17630 | Not Available | Positive | 4269071 - 4269526 | 17915.8 |
| aspartate aminotransferase family protein | DPV69_17635 | Not Available | Positive | 4269630 - 4270826 | 43192.4 |
| response regulator transcription factor | DPV69_17640 | Not Available | Positive | 4270833 - 4271510 | 25997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

