Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DPV69_16985 | Not Available | Negative | 4128167 - 4129594 | 53388.6 |
| susc/raga family tonb-linked outer membrane protein | DPV69_16990 | Not Available | Negative | 4129607 - 4132948 | 124439.0 |
| fecr family protein | DPV69_16995 | Not Available | Negative | 4133011 - 4134174 | 44010.7 |
| rna polymerase sigma-70 factor | DPV69_17000 | Not Available | Negative | 4134242 - 4134811 | 21565.1 |
| tetratricopeptide repeat protein | DPV69_17005 | Not Available | Negative | 4135216 - 4136967 | 67471.7 |
| rna-binding protein | DPV69_17010 | Not Available | Positive | 4137074 - 4137901 | 30760.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DPV69_17015 | Not Available | Negative | 4138200 - 4139366 | 42804.1 |
| osmc family peroxiredoxin | DPV69_17020 | Not Available | Negative | 4139448 - 4139867 | 15449.7 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DPV69_17025 | Not Available | Negative | 4139936 - 4140739 | 29744.7 |
| duf1287 domain-containing protein | DPV69_17030 | Not Available | Negative | 4140827 - 4141414 | 22390.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

