Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DPV69_01620 | Not Available | Negative | 399488 - 399682 | 7212.63 |
| dinb family protein | DPV69_01625 | Not Available | Negative | 399772 - 400233 | 17409.2 |
| thua domain-containing protein | DPV69_01630 | Not Available | Negative | 400282 - 401121 | 32543.5 |
| s9 family peptidase | DPV69_01635 | Not Available | Negative | 401190 - 403613 | 89338.9 |
| hypothetical protein | DPV69_01640 | Not Available | Negative | 403716 - 405071 | 49682.3 |
| rna polymerase sigma factor | DPV69_01645 | Not Available | Negative | 405079 - 405627 | 21255.4 |
| dead/deah box helicase | DPV69_01650 | Not Available | Positive | 405871 - 407178 | 49240.7 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DPV69_01655 | Not Available | Negative | 407175 - 407786 | 23442.2 |
| four helix bundle protein | DPV69_01660 | Not Available | Positive | 407919 - 408275 | 13630.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DPV69_01665 | Not Available | Negative | 408300 - 409154 | 31843.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

