Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | DPV69_16435 | Not Available | Positive | 3994998 - 3995831 | 30745.8 |
| endonuclease | DPV69_16440 | Not Available | Positive | 3995831 - 3996964 | 43525.3 |
| cysteine--trna ligase | DPV69_16445 | Not Available | Positive | 3996991 - 3998451 | 54993.7 |
| m28 family peptidase | DPV69_16450 | Not Available | Positive | 3998492 - 3999481 | 36573.8 |
| nuclear transport factor 2 family protein | DPV69_16455 | Not Available | Positive | 3999594 - 4000460 | 31995.1 |
| glycerophosphodiester phosphodiesterase | DPV69_16460 | Not Available | Positive | 4000719 - 4001609 | 33760.2 |
| hypothetical protein | DPV69_16465 | Not Available | Negative | 4001708 - 4001917 | 7668.17 |
| copper-translocating p-type atpase | DPV69_16470 | Not Available | Negative | 4001966 - 4004389 | 87254.3 |
| phenylalanyl-trna synthetase subunit alpha | DPV69_16475 | Not Available | Positive | 4004567 - 4004677 | 3972.78 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DPV69_16480 | Not Available | Positive | 4004802 - 4006232 | 53724.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

