Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2306 domain-containing protein | DPV69_16385 | Not Available | Negative | 3984833 - 3985405 | 22048.0 |
| cbs domain-containing protein | DPV69_16390 | Not Available | Negative | 3985560 - 3985988 | 15702.3 |
| gh3 auxin-responsive promoter family protein | DPV69_16395 | Not Available | Negative | 3986056 - 3987564 | 58356.5 |
| lps export abc transporter atp-binding protein | DPV69_16400 | Not Available | Negative | 3987574 - 3988308 | 27343.5 |
| single-stranded-dna-specific exonuclease recj | DPV69_16405 | Not Available | Negative | 3988384 - 3990087 | 64321.0 |
| mbl fold metallo-hydrolase | DPV69_16410 | Not Available | Positive | 3990204 - 3990968 | 29107.3 |
| response regulator | DPV69_16415 | Not Available | Negative | 3990965 - 3991372 | 15226.4 |
| ycei family protein | DPV69_16420 | Not Available | Negative | 3991512 - 3992108 | 21450.8 |
| dna mismatch repair endonuclease mutl | DPV69_16425 | Not Available | Positive | 3992418 - 3994268 | 69170.6 |
| rhomboid family intramembrane serine protease | DPV69_16430 | Not Available | Positive | 3994271 - 3995005 | 27878.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

