Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | DPV69_16085 | Not Available | Positive | 3918193 - 3919095 | 33488.9 |
| heme-copper oxidase subunit iii | DPV69_16090 | Not Available | Positive | 3919098 - 3919676 | 21493.8 |
| cytochrome oxidase subunit iii | DPV69_16095 | Not Available | Positive | 3919708 - 3920409 | 26761.7 |
| caa(3)-type oxidase | DPV69_16100 | Not Available | Positive | 3920431 - 3920787 | 13746.2 |
| redoxin domain-containing protein | DPV69_16105 | Not Available | Positive | 3920788 - 3921492 | 26606.1 |
| duf420 domain-containing protein | DPV69_16110 | Not Available | Positive | 3921554 - 3922093 | 20444.9 |
| rna polymerase sigma-70 factor | DPV69_16115 | Not Available | Positive | 3922261 - 3922818 | 22310.9 |
| duf4974 domain-containing protein | DPV69_16120 | Not Available | Positive | 3922886 - 3924109 | 45559.3 |
| susc/raga family tonb-linked outer membrane protein | DPV69_16125 | Not Available | Positive | 3924373 - 3928029 | 136462.0 |
| ragb/susd family nutrient uptake outer membrane protein | DPV69_16130 | Not Available | Positive | 3928040 - 3929488 | 54590.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

