Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | DPV69_13760 | Not Available | Positive | 3325959 - 3327512 | 54119.5 |
| duf4197 domain-containing protein | DPV69_13765 | Not Available | Negative | 3327996 - 3328739 | 26260.8 |
| duf3520 domain-containing protein | DPV69_13770 | Not Available | Negative | 3328768 - 3330675 | 69506.9 |
| sigma-70 family rna polymerase sigma factor | DPV69_13775 | Not Available | Positive | 3330849 - 3331427 | 22647.1 |
| hypothetical protein | DPV69_13780 | Not Available | Positive | 3331417 - 3332700 | 46414.7 |
| fmn-binding negative transcriptional regulator | DPV69_13785 | Not Available | Positive | 3332702 - 3333313 | 22578.8 |
| l-serine ammonia-lyase | DPV69_13790 | Not Available | Negative | 3333564 - 3334991 | 51035.2 |
| xre family transcriptional regulator | DPV69_13795 | Not Available | Negative | 3335034 - 3335687 | 24548.6 |
| hypothetical protein | DPV69_13800 | Not Available | Positive | 3335891 - 3336490 | 23126.1 |
| hepn domain-containing protein | DPV69_13805 | Not Available | Positive | 3336504 - 3337319 | 31554.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

