Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | DPV69_13710 | Not Available | Positive | 3309239 - 3309934 | 26460.1 |
| glpgli family protein | DPV69_13715 | Not Available | Negative | 3310059 - 3310844 | 29479.1 |
| tonb-dependent receptor | DPV69_13720 | Not Available | Negative | 3310861 - 3313641 | 103862.0 |
| duf4153 domain-containing protein | DPV69_13725 | Not Available | Positive | 3313776 - 3315602 | 69089.5 |
| helicase | DPV69_13730 | Not Available | Positive | 3315604 - 3317895 | 87124.9 |
| efflux transporter outer membrane subunit | DPV69_13735 | Not Available | Negative | 3318274 - 3319683 | 51370.0 |
| efflux rnd transporter permease subunit | DPV69_13740 | Not Available | Negative | 3319698 - 3322874 | 114953.0 |
| efflux rnd transporter periplasmic adaptor subunit | DPV69_13745 | Not Available | Negative | 3323004 - 3324179 | 41759.1 |
| tetr/acrr family transcriptional regulator | DPV69_13750 | Not Available | Negative | 3324204 - 3324776 | 22400.6 |
| diaminopimelate epimerase | DPV69_13755 | Not Available | Negative | 3324934 - 3325722 | 29261.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

