Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DPV69_12960 | Not Available | Negative | 3139476 - 3140225 | 29002.7 |
| giy-yig nuclease family protein | DPV69_12965 | Not Available | Negative | 3140531 - 3140827 | 11458.8 |
| glycosyltransferase | DPV69_12970 | Not Available | Negative | 3141099 - 3142382 | 48253.4 |
| pdz domain-containing protein | DPV69_12975 | Not Available | Positive | 3142449 - 3145625 | 120354.0 |
| methyltransferase domain-containing protein | DPV69_12980 | Not Available | Positive | 3145770 - 3146522 | 29136.1 |
| rhomboid family intramembrane serine protease | DPV69_12985 | Not Available | Positive | 3146538 - 3148088 | 59343.6 |
| alpha-l-fucosidase | DPV69_12990 | Not Available | Negative | 3148077 - 3149534 | 54537.9 |
| glycosyltransferase | DPV69_12995 | Not Available | Negative | 3149739 - 3150641 | 34776.5 |
| fkbm family methyltransferase | DPV69_13000 | Not Available | Negative | 3150683 - 3151330 | 24439.2 |
| flippase | DPV69_13005 | Not Available | Negative | 3151327 - 3152658 | 49943.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

