Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DPV69_12460 | Not Available | Positive | 3008944 - 3011967 | 110068.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DPV69_12465 | Not Available | Positive | 3011980 - 3013551 | 58934.1 |
| hypothetical protein | DPV69_12470 | Not Available | Positive | 3013570 - 3014334 | 28091.7 |
| pkd domain-containing protein | DPV69_12475 | Not Available | Positive | 3014345 - 3015973 | 59011.0 |
| chitinase | DPV69_12480 | Not Available | Positive | 3016022 - 3017032 | 36697.0 |
| susc/raga family tonb-linked outer membrane protein | DPV69_12485 | Not Available | Positive | 3017300 - 3020401 | 112720.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DPV69_12490 | Not Available | Positive | 3020424 - 3022103 | 61744.1 |
| duf4397 domain-containing protein | DPV69_12495 | Not Available | Positive | 3022012 - 3022908 | 32691.4 |
| hypothetical protein | DPV69_12500 | Not Available | Negative | 3022976 - 3023323 | 12579.8 |
| susc/raga family tonb-linked outer membrane protein | DPV69_12505 | Not Available | Positive | 3023613 - 3026768 | 113654.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

