Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DPV69_12205 | Not Available | Positive | 2940218 - 2943346 | 112988.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DPV69_12210 | Not Available | Positive | 2943365 - 2944843 | 53595.1 |
| hypothetical protein | DPV69_12215 | Not Available | Positive | 2944853 - 2945302 | 15361.5 |
| doxx family protein | DPV69_12220 | Not Available | Negative | 2945363 - 2945770 | 14569.6 |
| ld-carboxypeptidase | DPV69_12225 | Not Available | Negative | 2945772 - 2946671 | 33377.2 |
| methionine--trna ligase | DPV69_12230 | Not Available | Positive | 2946708 - 2948822 | 79572.6 |
| mechanosensitive ion channel | DPV69_12235 | Not Available | Positive | 2948853 - 2950136 | 48667.2 |
| hypothetical protein | DPV69_12240 | Not Available | Negative | 2950152 - 2950427 | 9858.51 |
| Trna-arg | Not Available | Not Available | Positive | 2950488 - 2950559 | Not Available |
| rok family protein | DPV69_12250 | Not Available | Positive | 2950749 - 2952020 | 45500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

