Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | DPV69_12005 | Not Available | Negative | 2884794 - 2885918 | 42332.3 |
| metalloprotease | DPV69_12010 | Not Available | Negative | 2885990 - 2886835 | 30843.1 |
| response regulator transcription factor | DPV69_12015 | Not Available | Negative | 2886891 - 2887589 | 26197.2 |
| hamp domain-containing histidine kinase | DPV69_12020 | Not Available | Negative | 2887577 - 2889070 | 57678.4 |
| hypothetical protein | DPV69_12025 | Not Available | Positive | 2889190 - 2889804 | 23624.9 |
| glutamate--trna ligase | DPV69_12030 | Not Available | Negative | 2889867 - 2891375 | 56331.6 |
| hamp domain-containing histidine kinase | DPV69_12035 | Not Available | Positive | 2891686 - 2892915 | 47108.1 |
| dinb family protein | DPV69_12040 | Not Available | Positive | 2892875 - 2893378 | 19202.8 |
| hotdog fold thioesterase | DPV69_12045 | Not Available | Positive | 2893487 - 2893915 | 15506.0 |
| dna topoisomerase ib | DPV69_12050 | Not Available | Positive | 2893963 - 2895012 | 40130.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

