Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3078 domain-containing protein | DPV69_11555 | Not Available | Positive | 2779390 - 2780382 | 37266.7 |
| signal recognition particle protein | DPV69_11560 | Not Available | Positive | 2780691 - 2782025 | 48950.7 |
| ybjq family protein | DPV69_11565 | Not Available | Negative | 2782184 - 2782507 | 11223.5 |
| hypothetical protein | DPV69_11570 | Not Available | Positive | 2782720 - 2783406 | 25527.6 |
| response regulator transcription factor | DPV69_11575 | Not Available | Positive | 2783475 - 2783693 | 8211.15 |
| tail-specific protease | DPV69_11580 | Not Available | Positive | 2783800 - 2786028 | 83052.5 |
| dsba family oxidoreductase | DPV69_11585 | Not Available | Negative | 2786204 - 2786920 | 26787.4 |
| peptidase | DPV69_11590 | Not Available | Negative | 2787197 - 2789881 | 99261.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DPV69_11595 | Not Available | Positive | 2790494 - 2792797 | 87370.6 |
| acyl-coa thioesterase | DPV69_11600 | Not Available | Positive | 2792862 - 2793248 | 14445.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

