Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | DPV69_11050 | Not Available | Positive | 2671080 - 2671553 | 17495.0 |
| superoxide dismutase | DPV69_11055 | Not Available | Positive | 2671639 - 2672253 | 22443.4 |
| hypothetical protein | DPV69_11060 | Not Available | Positive | 2672522 - 2673091 | 20925.8 |
| hypothetical protein | DPV69_11065 | Not Available | Positive | 2673159 - 2673608 | 16685.2 |
| duf2784 domain-containing protein | DPV69_11070 | Not Available | Positive | 2673605 - 2673979 | 14236.8 |
| ragb/susd family nutrient uptake outer membrane protein | DPV69_11075 | Not Available | Negative | 2674039 - 2675505 | 53849.2 |
| tonb-dependent receptor | DPV69_11080 | Not Available | Negative | 2675522 - 2678707 | 114372.0 |
| arac family transcriptional regulator | DPV69_11085 | Not Available | Negative | 2679006 - 2679902 | 34811.0 |
| voc family protein | DPV69_11090 | Not Available | Negative | 2679918 - 2680274 | 14067.8 |
| response regulator transcription factor | DPV69_11095 | Not Available | Negative | 2680353 - 2680979 | 23513.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

