Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter chitinilyticus strain CM134L-2
Accession NumberSAYW00000000.1
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DPV69_00040 | Not Available | - | 10285 - 12078 | 67838.8 |
| hypothetical protein | DPV69_00045 | Not Available | - | 12110 - 13816 | 63445.1 |
| tetratricopeptide repeat protein | DPV69_00050 | Not Available | - | 13828 - 16845 | 115277.0 |
| hypothetical protein | DPV69_00055 | Not Available | - | 17107 - 17418 | 12415.0 |
| aspartate carbamoyltransferase catalytic subunit | DPV69_00060 | Not Available | - | 17418 - 18353 | 34283.9 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | DPV69_00065 | Not Available | - | 18355 - 18900 | 20778.2 |
| marr family transcriptional regulator | DPV69_00070 | Not Available | + | 19296 - 19742 | 17098.0 |
| tolc family protein | DPV69_00075 | Not Available | + | 19744 - 21132 | 51879.7 |
| biotin/lipoyl-binding protein | DPV69_00080 | Not Available | + | 21136 - 22098 | 35476.0 |
| abc transporter permease | DPV69_00085 | Not Available | + | 22098 - 23261 | 43985.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.