Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | DPV69_08875 | Not Available | Negative | 2167428 - 2170277 | 102033.0 |
| tonb-dependent receptor | DPV69_08880 | Not Available | Negative | 2170358 - 2172820 | 92231.8 |
| m56 family metallopeptidase | DPV69_08885 | Not Available | Negative | 2172847 - 2174466 | 60206.8 |
| blai/meci/copy family transcriptional regulator | DPV69_08890 | Not Available | Negative | 2174497 - 2174889 | 15072.1 |
| extradiol dioxygenase | DPV69_08895 | Not Available | Positive | 2175082 - 2175495 | 15318.2 |
| srpbcc domain-containing protein | DPV69_08900 | Not Available | Positive | 2175508 - 2175948 | 16918.8 |
| nadp-dependent isocitrate dehydrogenase | DPV69_08910 | Not Available | Negative | 2177032 - 2179251 | 79639.6 |
| hypothetical protein | DPV69_08915 | Not Available | Positive | 2179679 - 2180035 | 13099.6 |
| sigma-70 family rna polymerase sigma factor | DPV69_08920 | Not Available | Positive | 2180016 - 2181284 | 48299.7 |
| type i methionyl aminopeptidase | DPV69_08925 | Not Available | Positive | 2181339 - 2182103 | 27954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

