Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | DPV69_08825 | Not Available | Negative | 2156559 - 2156813 | 9697.15 |
| phosphoribosylglycinamide formyltransferase | DPV69_08830 | Not Available | Positive | 2157046 - 2157624 | 22090.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DPV69_08835 | Not Available | Positive | 2157858 - 2159384 | 55563.2 |
| rod shape-determining protein | DPV69_08840 | Not Available | Positive | 2159786 - 2160808 | 36830.1 |
| rod shape-determining protein mrec | DPV69_08845 | Not Available | Positive | 2160882 - 2161721 | 31148.6 |
| rod shape-determining protein mred | DPV69_08850 | Not Available | Positive | 2161711 - 2162226 | 19808.9 |
| penicillin-binding protein 2 | DPV69_08855 | Not Available | Positive | 2162226 - 2164202 | 73651.8 |
| rod shape-determining protein roda | DPV69_08860 | Not Available | Positive | 2164186 - 2165448 | 46854.9 |
| hypothetical protein | DPV69_08865 | Not Available | Negative | 2165570 - 2166724 | 44234.0 |
| thymidine kinase | DPV69_08870 | Not Available | Positive | 2166819 - 2167394 | 20906.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

