Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | DPV69_08075 | Not Available | Negative | 1980286 - 1982649 | 89387.3 |
| rna polymerase sigma-70 factor | DPV69_08080 | Not Available | Positive | 1982930 - 1983493 | 21923.3 |
| fecr family protein | DPV69_08085 | Not Available | Positive | 1983573 - 1984703 | 41906.8 |
| susc/raga family tonb-linked outer membrane protein | DPV69_08090 | Not Available | Positive | 1984829 - 1988200 | 125558.0 |
| ragb/susd family nutrient uptake outer membrane protein | DPV69_08095 | Not Available | Positive | 1988207 - 1989643 | 54673.0 |
| duf4843 domain-containing protein | DPV69_08100 | Not Available | Positive | 1989662 - 1990462 | 29830.6 |
| hypothetical protein | DPV69_08105 | Not Available | Positive | 1990484 - 1992031 | 57954.5 |
| tlpa family protein disulfide reductase | DPV69_08110 | Not Available | Positive | 1992097 - 1993476 | 52101.6 |
| hypothetical protein | DPV69_08115 | Not Available | Positive | 1993533 - 1994711 | 43072.1 |
| hypothetical protein | DPV69_08120 | Not Available | Negative | 1994851 - 1995579 | 27838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

