Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chitinilyticus |
| Strain | strain CM134L-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1541122 bp
Thymine Count
1530322 bp
Guanine Count
982715 bp
Cytosine Count
998084 bp
Genome Length
5052900 bp
Protein-coding Genes
4066 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DPV69_05260 | Not Available | Negative | 1264083 - 1265522 | 53673.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DPV69_05265 | Not Available | Negative | 1265586 - 1266251 | 24394.7 |
| sugar kinase | DPV69_05270 | Not Available | Negative | 1266244 - 1267257 | 38041.4 |
| glucuronate isomerase | DPV69_05275 | Not Available | Negative | 1267340 - 1268740 | 53988.9 |
| sdr family oxidoreductase | DPV69_05280 | Not Available | Negative | 1268823 - 1269638 | 28789.8 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DPV69_05285 | Not Available | Negative | 1269749 - 1270579 | 30971.5 |
| altronate dehydratase | DPV69_05290 | Not Available | Negative | 1270649 - 1272292 | 59319.8 |
| tagaturonate reductase | DPV69_05295 | Not Available | Negative | 1272293 - 1273807 | 56539.8 |
| hypothetical protein | DPV69_05300 | Not Available | Negative | 1274026 - 1279797 | 220907.0 |
| duf480 domain-containing protein | DPV69_05305 | Not Available | Positive | 1279932 - 1280579 | 24349.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

