Shigella flexneri strain 551537

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri strain 551537 is a Gram-negative, rod-shaped bacterium that typically appears in pairs or as single cells. This strain does not form spores and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It is a chemoorganotroph, meaning it derives its energy from organic compounds, which is indicative of its reliance on host-associated habitats for nutrients. The optimal growth temperature for S. flexneri strain 551537 is 37.0°C, aligning with the physiological conditions of the mammalian gut, where it is commonly found. As a member of the genus Shigella, this strain is part of a group of bacteria known for their association with human hosts, particularly in the context of gastrointestinal infections. While the specific pathogenic traits of strain 551537 are not detailed in the provided data, its habitat and growth characteristics suggest a potential role in host-microbe interactions within the intestinal microbiome. Understanding the environmental preferences and metabolic capabilities of S. flexneri strain 551537 may provide insights into its ecological niche and potential interactions with other gut microbiota, which could influence overall gut health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri strain 551537
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella flexneri strain 551537

Accession NumberRTMN00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4148 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf4222 domain-containing proteinDOU91_03180Not Available+622317 - 62261611468.8
Primase/helicaseDOU91_03185Not Available+622613 - 62401351996.9
hypothetical proteinDOU91_03190Not Available+624213 - 6244649491.28
Putative ssdna binding proteinDOU91_03195Not Available+624461 - 62487114308.8
Transcriptional regulatorDOU91_03200Not Available+624882 - 62515410521.3
trigger factorDOU91_03205Not Available+625123 - 6252394221.22
hypothetical proteinDOU91_03210Not Available+625393 - 6255997329.92
Bacteriophage major capsid proteinDOU91_03215Not Available+625599 - 62665439599.3
Head decoration protein dDOU91_03220Not Available+626666 - 62700111971.1
phage head-tail connector proteinDOU91_03225Not Available+627014 - 62742715240.2

Displaying genes 11 – 20 of 4396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

11 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da

Displaying 1–10 of 11 metabolites